<p>Lower glacial atmospheric CO<sub>2</sub> concentrations have been attributed to carbon sequestration in deep oceans. However, potential roles of voluminous subtropical North Pacific in modulating atmospheric CO<sub>2</sub> levels on millennial timescale are poorly constrained. Further, an increase in respired CO<sub>2</sub> concentration in the glacial deep ocean due to biological pump generally is coeval with less oxygenation in the subsurface layer. This link thus offers a chance to visit oceanic ventilation and the coeval export productivity based on redox-controlled sedimentary geochemical parameters. Here we investigate a suite of sediment geochemical proxies to understand the sedimentary oxygenation variations in the subtropical North Pacific (core CSH1) over the last 50 thousand years (ka). Our results suggest that sedimentary oxygenation at mid-depths of the subtropical North Pacific intensifies during the episodes of late glacial (50–25 ka), Last Glacial Maximum (LGM) and also the interval after 8.5 ka, especially pronounced for the North Atlantic millennial-scale abrupt cold events of the Younger Dryas, Heinrich Stadial (HS) 1 and 2. On the other hand, oxygen-depleted seawater is found during the Bölling-Alleröd (B/A) and Preboreal. Our findings of enhanced sedimentary oxygenation in the subtropical North Pacific is aligned with intensified formation of North Pacific Intermediate Water (NPIW) during cold spells, while the ameliorated sedimentary oxygenation seems to be linked with the intensified Kuroshio Current since 8.5 ka. In our results, diminished sedimentary oxygenation during the B/A indicates an enhanced CO<sub>2</sub> sequestration at mid-depth waters, along with slight increase in atmospheric CO<sub>2</sub> concentration. Mechanistically, we speculate that these millennial-scale changes were linked to the strength of North Atlantic Deep Water, leading to intensification of NPIW formation and enhanced abyss flushing during deglacial cold and warm intervals, respectively. Enhanced formation of NPIW seem to be driven by the perturbation of sea ice formation and sea surface salinity oscillation in high latitude North Pacific through atmospheric and oceanic teleconnection. During the B/A, decreased sedimentary oxygenation likely resulted from an upward penetration of aged deep water into the intermediate-depth in the North Pacific, corresponding to a resumption of Atlantic Meridional Overturning Circulation.</p>